Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931839.1_cds_XP_016478505.1_70138
CDS Infomation

[gene=LOC107799888] [db_xref=GeneID:107799888] [protein=ubiquitin carboxyl-terminal hydrolase 15-like] [partial=3'] [protein_id=XP_016478505.1] [location=complement(join(<7..213,658..742,851..1008,1115..1238,1432..1594,1677..1762,1921..2009,2227..2378,2455..2875,2956..3403,4874..5166))] [gbkey=CDS]
Sequence

ATGCTTCAGCCAAGGGAAACCGACATTCCTGCTTTATTTTTGGTCCTGGTTGTGCTTCCC
CTGGTTTCTTATATCCTTCTAGGCAAATGGAATGAGGCAGCCAAAAAGAAAGAGAGGGTT
GGTTTGCTGGCTCAACGGGCTGCTGAAGAAGCTTTTAAGTCAGAAACTGTGCCTGCTGTA
AGTATTATCCCTACCCCTCTTGTGCCTTTGCCAAGCAGTGCAATTCATCAGTGTGCAAGA
TGCCATAGTCCAGCCACAACTCGGTGCTCTCAATGCAAATCTGTTCGATATTGCTCAGGG
AAGTGTCAGATTCTCCACTGGAGACAGGTTCACAAGCTAGAGTGTCATCAATTGGGTAAC
AACTGCAACAGCTCATTCTCTCAGTCTGCATTGACTGATGAATTCCCGGGACGAGTGTCA
TTTGATAGTTATGTTGAAGCGCAGTACAGTGACGGCAACATTAATCAGTCATGGCTTGGC
AAAGCTCCTCCAGATGGTGTCTCTGAAACATCCATTATCACACCACTCACCCCTACTGCT
GTTAGTATGGTAATGGATACATCAGTAGCTCCAAAAGTTGGGATACGACCTGTAGACAAG
AGACTACATAAAGGCAACAGAGACATATTAAGAAGAGGGGAAGGAACCATGTCCGAGAGT
TCTGAGCAAGCCTCTCAATCTAGGGTTACTACTTCCCCCTCATGTGCTATCTCTTCAACA
GAACGTTCTATGAACCAGAAGTCAAGAGAAAGTGAGTCCATGTTTTCGGAACATGATAGC
ATCGCGGATGGATTCAATAGTGAACAAGCTGATTTGATGAGTACAATGGGAGAACGCCAT
ATGTTACAAAAGCAGAGGGAACACATCTCAAGAAATCATCGTCACATTTCAAGTTCATTG
AATCTAGAAGGCCATGAAATGAGTGCATGCAAGAATCAGAAGGAGTTGATTGATGAAGAA
AGTCTTATACGAGAAGGCATCATTACCAGCACTCAGGCAATTCCATTGACTTGCACTCAT
GGAAAGACTTCAACAAGGAGAAGCAGTAGAGTGAAAAGTGCATCACATTCTCAAGTAGCA
AAGTCCCATAGAACGCCCAAAATATCAAGAGAAGAAATGTGTTCAGGTTTGGAAGGAAAC
AGCCACAATATCGACGAGTCAAAAAATGCTAGAAGAAAGGATGCCGTCCCTCCACAAGCA
GGCAATGGGGTTGCAAACATGGGCATTATGAGAATGTTTGGTCTGGTTAAATCATCAAAA
GTTGATAGACATCAATCCATAGAATCCAGGGCTGACAAACACAAGAAACTAAAGATGCTG
TTTCCTTATGAAGAATTTGTGAAGTTATTTGAATATGAAGACTTCACTTTGTTGCCTAGA
GGTATCATAAATTGCGGGAATAGTTGTTATGCCAATGCTGTCTTGCAGTGTCTGACCTTC
ACAAAGCCTTTAACAATCTACCTGCTTCGCAGATCACATTCTAGAACTTACTGCAGGAGA
GATTGGTGCCTTATGTGTGAACTTGAGCAACATGTGATGTTGTTAAGAGAAAGTGGAGGT
CCTCTGTCGCCAAGCAGGATTCTTTTGCATATGCGGAGCATTAATGGCCAGATTGGCAAT
GGCAGTCAGGAAGATGCTCACGAGTTTTTAAGGCTTCTTGTTGCTTCTATGCAATCTATA
TGCTTGGAGGCATTGGGTGGAGAAAATGCTGTTGATCCAAGATTGCAGGAAACGACCTTT
ATACAACACACTTTCGGAGGGCGTCTTAGATCTAAGGTCAAATGCCTGAGATGCCACCAC
GAGTCGGAGTGCTACGAAAATATCATGGATCTCTCATTGGAGATCTTTGGTTGGGTTGAG
TCACTTGAAGATGCATTGACGCAGTTTACAAGTCCCGAAGATCTTGATGGGGAAAACATG
TATAGATGCGGAAGGTGCGCTTGTTATGTTCGTGCACAAAAGCAGTTGAGCATACAGGAG
GCTCCAAATATCTTGACTATTGTCTTGAAGAGATTTCAGGAAGGAAGTTATGGGAAGATA
AATAAGTGCATCACTTTTCCAGATATGCTGGATATGATACCATTTATGACTGCGACAGAT
GACATTCCTCCACTTTACATGCTTTATGCTGTTGTTGTGCACTTGGATACCTTAAATGCA
TCATTTTCCGGGCATTACATATCCTACGTGAAGGATCTACACCGACAAGGCAATTGGTTC
AGGATT

Peptide Sequence

PEP ID

XP_016478505.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial [Nicotiana tabacum]
Sequence

MLQPRETDIPALFLVLVVLPLVSYILLGKWNEAAKKKERVGLLAQRAAEEAFKSETVPAV
SIIPTPLVPLPSSAIHQCARCHSPATTRCSQCKSVRYCSGKCQILHWRQVHKLECHQLGN
NCNSSFSQSALTDEFPGRVSFDSYVEAQYSDGNINQSWLGKAPPDGVSETSIITPLTPTA
VSMVMDTSVAPKVGIRPVDKRLHKGNRDILRRGEGTMSESSEQASQSRVTTSPSCAISST
ERSMNQKSRESESMFSEHDSIADGFNSEQADLMSTMGERHMLQKQREHISRNHRHISSSL
NLEGHEMSACKNQKELIDEESLIREGIITSTQAIPLTCTHGKTSTRRSSRVKSASHSQVA
KSHRTPKISREEMCSGLEGNSHNIDESKNARRKDAVPPQAGNGVANMGIMRMFGLVKSSK
VDRHQSIESRADKHKKLKMLFPYEEFVKLFEYEDFTLLPRGIINCGNSCYANAVLQCLTF
TKPLTIYLLRRSHSRTYCRRDWCLMCELEQHVMLLRESGGPLSPSRILLHMRSINGQIGN
GSQEDAHEFLRLLVASMQSICLEALGGENAVDPRLQETTFIQHTFGGRLRSKVKCLRCHH
ESECYENIMDLSLEIFGWVESLEDALTQFTSPEDLDGENMYRCGRCACYVRAQKQLSIQE
APNILTIVLKRFQEGSYGKINKCITFPDMLDMIPFMTATDDIPPLYMLYAVVVHLDTLNA
SFSGHYISYVKDLHRQGNWFRI

Transcript Sequence

Gene sequence data has not been registered.